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Of course all the sub-atomic particles are interconnected... but that doesn't mean they are a hologram. They all have the same origins in big bang. Every subatomic particle in the world today was once a part of a point in the universe squished together so that it had infinite mass and infinite temperature and there was no time. When "space" started to expand shortly after time "zero" all those particles started to move in different directions in the 4 dimensional world. They had the same point of departure so it's obvious they'll be conected forever - always effecting on eachother like a chain reaction.
I don't like the hologram theory cause the hologram is just a projection of something unreal, an illusion of light. Space though is not solid matter either - it's made up of charges and wave lenghts of fundamental particles (electrons, quarks...) but that is still "something". Those particles are not an "illusion". They have a charge (positive, negative neutral) and they have a mass. Hologram doesn't have a mass. Since a hologram is made out of light and light is made out of nevrinos (I don't know if this is the english word - but those are particles that radiate from the sun and shower the earth everyday...they have no mass, no electric charge and they travel with light speed.)
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